MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Neisseria sp.
19428wB4_WF04
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 263
bases: 2,606,596 bps
CDS: 2,592
rRNA: 3
tRNA: 48
tmRNA: 1
Total number of protein coding genes annotated/found:
2,426
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5039|JADGLG010000021.1
MBF0803973.1
Genome Viewer
NA
AA
1095/365
27948-29042
chorismate synthase
SEQF5039|JADGLG010000032.1
MBF0804283.1
Genome Viewer
NA
AA
765/255
18256-17492
type I 3-dehydroquinate dehydratase
SEQF5039|JADGLG010000042.1
MBF0804518.1
Genome Viewer
NA
AA
819/273
20871-20053
shikimate dehydrogenase
SEQF5039|JADGLG010000048.1
MBF0804608.1
Genome Viewer
NA
AA
1047/349
1530-484
3-deoxy-7-phosphoheptulonate synthase AroG
SEQF5039|JADGLG010000066.1
MBF0804842.1
Genome Viewer
NA
AA
357/119
7172-7528
arsenate reductase (glutaredoxin)
SEQF5039|JADGLG010000034.1
MBF0804315.1
Genome Viewer
NA
AA
1122/374
1280-159
aspartate-semialdehyde dehydrogenase
SEQF5039|JADGLG010000027.1
MBF0804150.1
Genome Viewer
NA
AA
1419/473
13570-14988
aspartate ammonia-lyase
SEQF5039|JADGLG010000019.1
MBF0803890.1
Genome Viewer
NA
AA
1809/603
33001-31193
aspartate--tRNA ligase
SEQF5039|JADGLG010000004.1
MBF0803094.1
Genome Viewer
NA
AA
870/290
13056-12187
F0F1 ATP synthase subunit A
SEQF5039|JADGLG010000004.1
MBF0803088.1
Genome Viewer
NA
AA
1398/466
8283-6886
F0F1 ATP synthase subunit beta
SEQF5039|JADGLG010000004.1
MBF0803093.1
Genome Viewer
NA
AA
234/78
12098-11865
F0F1 ATP synthase subunit C
SEQF5039|JADGLG010000004.1
MBF0803089.1
Genome Viewer
NA
AA
876/292
9195-8320
F0F1 ATP synthase subunit gamma
SEQF5039|JADGLG010000002.1
MBF0802990.1
Genome Viewer
NA
AA
567/189
103470-104036
azurin
SEQF5039|JADGLG010000006.1
MBF0803226.1
Genome Viewer
NA
AA
2400/800
5869-3470
outer membrane protein assembly factor BamA
SEQF5039|JADGLG010000013.1
MBF0803672.1
Genome Viewer
NA
AA
1134/378
46285-47418
outer membrane protein assembly factor BamC
SEQF5039|JADGLG010000054.1
MBF0804704.1
Genome Viewer
NA
AA
1164/388
10436-9273
benzoate/H(+) symporter BenE family transporter
SEQF5039|JADGLG010000016.1
MBF0803790.1
Genome Viewer
NA
AA
1695/565
38633-36939
choline dehydrogenase
SEQF5039|JADGLG010000016.1
MBF0803792.1
Genome Viewer
NA
AA
1464/488
41123-39660
betaine-aldehyde dehydrogenase
SEQF5039|JADGLG010000001.1
MBF0802782.1
Genome Viewer
NA
AA
465/155
20375-20839
bacterioferritin
SEQF5039|JADGLG010000001.1
MBF0802783.1
Genome Viewer
NA
AA
474/158
20864-21337
bacterioferritin
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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